I’m currently a Postdoctoral Fellow in the lab of Nils
Gehlenborg at Harvard Medical School. Previously, I
was a PhD student working on modelling the tertiary structure of RNA molecules
at the Theoretical Biochemistry Group at the
University of Vienna. If you’re interested, you can find a short form copy of
my CV here.
Feel free to email me at pkerpedjiev(at)gmail.com or follow me on
Google+. In case you’re interested
in updates to my blog, there’s an Atom feed here.
The source code for this web page can be found on github.
- higlass - Web-based genome contact matrix visualization and comparison
- forna - A tool for displaying the secondary structure of RNA.
- forgi - A library for annotating and manipulating RNA secondary structure.
- bwa-pssm - A short read aligner using position-specific scoring matrices to encode the error probabilities for each base.